华中科技大学学报(医学版) ›› 2026, Vol. 55 ›› Issue (2): 155-163.doi: 10.3870/j.issn.1672-0741.25.01.008

• 论著 • 上一篇    下一篇

基于转录组基因表达谱构建胃癌免疫治疗反应的预测模型

郝天宇, 韩保林, 江为, 徐向上, 吴剑宏   

  1. 华中科技大学同济医学院附属同济医院胃肠外科,武汉 430030
  • 收稿日期:2025-07-28 出版日期:2026-04-15 发布日期:2026-04-16
  • 通讯作者: E-mail:jhwu@tjh.tjmu.edu.cn
  • 作者简介:郝天宇,男,2000年生,硕士研究生,E-mail:1365722697@qq.com

Constructing a Predictive Model for Gastric Cancer Immunotherapy Response Based on Transcriptomic Gene Expression Profiles

Hao Tianyu, Han Baolin, Jiang Wei et al   

  1. Department of Gastrointestinal Surgery,Tongji Hospital,Tongji Medical College,Huazhong University of Science and Technology,Wuhan 430030,China
  • Received:2025-07-28 Online:2026-04-15 Published:2026-04-16
  • Contact: E-mail:jhwu@tjh.tjmu.edu.cn

摘要: 目的 筛选影响胃癌免疫治疗反应的核心基因,基于关键基因建立预测胃癌免疫治疗反应的模型。方法 从GEO数据库、TIDE数据库下载胃癌免疫治疗患者的基因表达谱数据,综合利用差异表达基因分析和加权共表达网络分析(WGCNA)筛选出与胃癌免疫治疗相关的185个基因,进一步利用3种机器学习模型:最小绝对值收敛和选择算子算法(LASSO)、随机森林(Random Forest,RF)和支持向量机-递归特征消除(SVM-RFE)筛选出核心基因,随后基于核心基因构建胃癌免疫治疗预测模型并进行外部验证,采用ROC曲线评估模型预测效能。以GSE62254数据集进一步验证模型的预测能力,并结合单细胞分析探究核心基因在细胞亚群水平的表达差异。结果 基于上述方法,构建出由5个核心基因组成的免疫治疗反应预测模型,并利用预测模型将包含300例胃癌患者的队列分为高风险和低风险两个不同风险亚群,高风险组具有较高的肿瘤微环境细胞浸润、较高的TIDE评分、更明显的T细胞功能障碍、较高的肿瘤相关成纤维细胞评分和某些较高的免疫检查点分子表达,以及较低的微卫星不稳定性(MSI)评分,这些都提示了高风险组具有较高的免疫逃逸潜能,免疫检查点抑制剂对其疗效差。利用单细胞分析,在细胞亚群中鉴定出5个核心基因表达的异质性。结论 建立了基于胃癌免疫治疗反应性的差异表达核心基因的预测模型,该模型对推动胃癌免疫治疗及辅助肿瘤预后预测具有潜在价值。

关键词: 免疫治疗, 胃癌, 机器学习

Abstract: Objective To identify core genes influencing immunotherapy response in gastric cancer and to establish a corresponding predictive model. Methods Gene expression data from gastric cancer patients treated with immunotherapy were obtained from the GEO and the TIDE databases.Differentially expressed genes were screened,and weighted gene co-expression network analysis(WGCNA)was performed,identifying 185 genes associated with immunotherapy response for gastric cancer.Core genes were further selected via three machine-learning algorithms:Least Absolute Shrinkage and Selection Operator(LASSO),Random Forest(RF),and Support Vector Machine-Recursive Feature Elimination(SVM-RFE).A predictive model was constructed based on these core genes and validated externally.Model performance was assessed using ROC curves.Additional validation was carried out on an independent dataset GSE62254.Single-cell RNA sequencing was employed to examine the expression of core genes across cell subpopulations. Results A predictive model comprising five core genes was developed,which stratified a cohort of 300 gastric cancer patients into high- and low-risk subgroups.The high-risk group exhibited higher tumor-microenvironment infiltration,TIDE scores,T-cell dysfunction,cancer-associated fibroblast activity,and expression of specific immune-checkpoint molecules,together with lower microsatellite instability scores,collectively indicating enhanced immune escape potential and poorer response to immune checkpoint inhibitors.Single-cell analysis confirmed heterogeneous expression patterns of the five core genes among different cell types. Conclusion A robust predictive model based on differentially expressed core genes related to gastric cancer immunotherapy response was constructed.This model may offer potential value for future research and could aid in clinical decision-making.

Key words: immunotherapy, gastric cancer, machine learning

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