医学分子生物学杂志 ›› 2022, Vol. 19 ›› Issue (1): 51-55.doi: 10.3870/j.issn.1672-8009.2022.01.008

• 论著 • 上一篇    下一篇

利用巢式 PCR 来提高检测新冠病毒的灵敏度的探索

  

  1. 1上海市市西中学 上海市, 200040  2上海交通大学附属儿童医院, 上海市儿童医院, 上海交通大学医学遗传研究所 上海市, 200040  3国家卫生健康委医学胚胎分子生物学重点实验室、 上海市胚胎与生殖工程重点实验室 上海市, 200040
  • 出版日期:2022-01-31 发布日期:2022-02-25
  • 基金资助:
    上海交通大学医工交叉项目 (No. YG2021QN119), 上海市儿童医院面上项目 (No. 2020YGZM02)

Application of Nested-qRT-PCR to Improve Sensitivity of SARS-CoV2 Detection

  • Online:2022-01-31 Published:2022-02-25

摘要: 目的 目前, 中国新冠疫情虽已基本控制, 但仍需对新冠病毒进行大规模检测。 因而需建立或 改进能够特异灵敏大规模地检测新冠病毒的方法, 进一步提高新冠病毒检测的灵敏度和准确性。 方法 研 究设计巢式 PCR 偶联 qRT-PCR 的检测方法用以克服多人份样本混合稀释所造成的病毒拷贝数过低导致的 检测不准确。 首先, 通过外引物 PCR 大幅提高被检测样本的拷贝数, 再在此基础上通过荧光定量 PCR 检测 由国家疾控中心 (CDC) 推荐的 N 基因序列。 结果 在降低其检测假阳性率的同时, 最终可以将检测灵敏 度在原来的基础上提高了 3 个数量级, 稳定地检测到单个拷贝的病毒模板。 结论 此研究可大幅度提高新 冠病毒检测的灵敏度, 为大规模多人份样本混合检测提供可行的方法。

关键词: 新冠病毒, 核酸检测, 定量 PCR, 灵敏度, 假阳性率 

Abstract: Objective Although the epidemic of coronavirus disease 2019 (COVID-19) has been controlled in China, large-scale testing for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is still needed. Therefore, it is necessary to establish a method that can detect the new coronavirus on a large scale and improve the sensitivity and accuracy of the new coronavirus detection. Methods The dilution of mixed multiple samples could cause the low copy number of the virus and result in the inaccurate detection. The nested PCR coupled with qRT-PCR was designed to improve the sensitivity and accuracy of detection. The copy number of the tested sample was greatly increased by external primer PCR. The N gene sequence recommended by the National Center for Disease Control and Prevention (CDC) was then detected by fluorescent quantitative PCR. Results The false-positive rate of detection was reduced, and the detection sensitivity was increased by 3 orders of magnitude on the original basis, and a single copy of the virus template could be stably detected. Conclusion This Nested-qRT-PCR can greatly improve the sensitivity of new coronavirus detection and provide a feasible method for large-scale detection of mixed multiple samples. 

Key words: coronavirus, nucleic acid detection, qPCR, sensitivity, false-positive rate 

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